cospar.datasets.hematopoiesis_subsampled

cospar.datasets.hematopoiesis_subsampled(data_des='LARRY_sp500_ranking1')

Top 15% most heterogeneous clones of the hematopoiesis data set from

• Weinreb, C., Rodriguez-Fraticelli, A., Camargo, F. D. & Klein, A. M. Science 367, (2020)

This dataset has 3 time points for both the clones and the state measurements. This sub-sampled data better illustrates the power of CoSpar in robstly inferring differentiation dynamics from a noisy clonal dataset. Also, it is smaller and thus much faster to analyze.

Parameters

data_des : str

A key to label this dataset.