cospar.simulate.quantify_correlation_with_ground_truth_fate_bias_BifurcationModel

cospar.simulate.quantify_correlation_with_ground_truth_fate_bias_BifurcationModel(used_map, state_annote_0, cell_id_t1, cell_id_t2)

Quantify the correlation of an inferred fate bias with the actual one, using a map from the Bifurcation Model.

Parameters

used_map

Used tmap

state_annote_0

The actual state annotation outputed from the Bifurcation Model.

cell_id_t1

List of initial cell IDs

cell_id_t2

List of later cell IDs

Returns

fate_bias_corr – Correlation between the predicted and actual fate bias